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Scop superfamily

Web18 Oct 2012 · SCOP is a hierarchical domain classification system for proteins of known structure. The superfamily level has a clear definition: Protein domains belong to the … WebThe SCOP classification for the FAD-linked reductases, C-terminal domain superfamily including the families contained in it. Additional information provided includes InterPro …

SCOP: Superfamily: CBD9-like

WebThe function categories here aim to describe the dominant and most wide-spread function for each superfamily, as far as it is known today. ANNOTATION SCHEME We annotated … WebRoot: scop; Class: All beta proteins [48724] Fold: Immunoglobulin-like beta-sandwich [48725] sandwich; 7 strands in 2 sheets; greek-key some members of the fold have additional … lauren christensen new york times https://katieandaaron.net

SCOPe 2.08: Structural Classification of Proteins — extended

WebSuperfamily: Cytochrome P450 [48264] uperfamily. Families: Cytochrome P450 [48265] (23) Cytochrome P450-CAM [48266] Pseudomonas putida [48267] (64) SQ P00183. … WebThe crotonases comprise a widely distributed enzyme superfamily that has multiple roles in both primary and secondary metabolism. Many crotonases employ oxyanion hole … WebThe SUPERFAMILY hidden Markov model library representing all proteins of known structure predicts the domain architecture of protein sequences and classifies them at the SCOP … lauren chupp ey parthenon

Structural Classification of Proteins database - Wikipedia

Category:Superfamily database - Wikipedia

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Scop superfamily

SUPERFAMILY 1.75 including a domain-centric gene ontology …

WebWe evaluated the performance of DN-Fold along with 18 different methods on Lindahl’s benchmark dataset and on a large benchmark set extracted from SCOP 1.75 consisting of … Web31 Mar 2009 · The lysozyme-like domain superfamily is a large multi-membered superfamily with at least seven different families in the SCOP database, all of them unified by the …

Scop superfamily

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Web10 Jan 2024 · This can be saturated, a terminal alkene or a terminal alkyne and the three versions are usually co-produced. 66 The biosynthesis of the unsaturated versions in this …

Web10 Apr 2024 · In this context, a crucial role is played by a superfamily of proteins known as carbonic anhydrases (CAs, EC 4.2.1.1), which catalyze the reversible hydration of CO 2, … WebSUPERFAMILY is a database of structural and functional annotation for all proteins and genomes. The SUPERFAMILY annotation is based on a collection of hidden Markov …

Web1 Jul 2007 · The server can present the members of the assigned SCOP superfamily and provide both multiple sequence alignments and multiple structural alignments (Figure 2B) … WebSCOP (e) concise classification string. This is a dot notation used to concisely describe a SCOP (e) class, fold, superfamily, and family. For example, a.39.1.1 references the …

WebJ Leukoc Biol. 2015;98:173-84. 1 de agosto de 2015. CD5L, a soluble protein belonging to the SRCR superfamily, is expressed mostly by macrophages in lymphoid and inflamed …

WebThe SCOP database, created by manual inspection and abetted by a battery of automated methods, aims to provide a detailed and comprehensive description of the structural and … just the fax cover sheetWebThe SCOP version 2, release January 2024, contains 5134 families and 2485 superfamilies compared to 3902 families and 1962 superfamilies in SCOP 1.75. The classification levels … lauren cho foundWeb1 day ago · PstSCAB 2, member of the ATP-binding cassette (ABC) superfamily of transporters, consists of the Pi capture protein PstS, the transmembrane proteins PstC … lauren chunky woodWeb30 Sep 2015 · To answer this question, we focused on the immunoglobulin superfamily CD200, ... endothelial progenitor cells may also be recruited. 20,41 To study the effects of … lauren churchill allentownhttp://iris.physics.iisc.ernet.in/scop//data/scop.b.b.cae.b.A.html just the game liveWebAssign SCOP domains to your sequences using the SUPERFAMILY hidden Markov models. NEW: Get an early look at the future of SUPERFAMILY and beta test the new sequence … just the flightWeb1 Jan 2024 · The SCOP database in 2024: expanded classification of representative family and superfamily domains of known protein structures. 1 Europe PMC requires Javascript … just the finest meat loaf